CDS

Accession Number TCMCG013C20048
gbkey CDS
Protein Id XP_024955388.1
Location join(1029600..1031646,1032039..1032855,1033595..1033885,1033986..1034184)
Gene LOC102616503
GeneID 102616503
Organism Citrus sinensis

Protein

Length 1117aa
Molecule type protein
Topology linear
Data_file_division PLN
dblink BioProject:PRJNA225998
db_source XM_025099620.1
Definition phytochrome A [Citrus sinensis]

EGGNOG-MAPPER Annotation

COG_category K
Description Regulatory photoreceptor which exists in two forms that are reversibly interconvertible by light the Pr form that absorbs maximally in the red region of the spectrum and the Pfr form that absorbs maximally in the far-red region
KEGG_TC -
KEGG_Module -
KEGG_Reaction -
KEGG_rclass -
BRITE ko00000        [VIEW IN KEGG]
ko00001        [VIEW IN KEGG]
KEGG_ko ko:K12120        [VIEW IN KEGG]
EC -
KEGG_Pathway ko04712        [VIEW IN KEGG]
map04712        [VIEW IN KEGG]
GOs GO:0003674        [VIEW IN EMBL-EBI]
GO:0003676        [VIEW IN EMBL-EBI]
GO:0003723        [VIEW IN EMBL-EBI]
GO:0003729        [VIEW IN EMBL-EBI]
GO:0003824        [VIEW IN EMBL-EBI]
GO:0004672        [VIEW IN EMBL-EBI]
GO:0005488        [VIEW IN EMBL-EBI]
GO:0005515        [VIEW IN EMBL-EBI]
GO:0005575        [VIEW IN EMBL-EBI]
GO:0005622        [VIEW IN EMBL-EBI]
GO:0005623        [VIEW IN EMBL-EBI]
GO:0005634        [VIEW IN EMBL-EBI]
GO:0005654        [VIEW IN EMBL-EBI]
GO:0005737        [VIEW IN EMBL-EBI]
GO:0006417        [VIEW IN EMBL-EBI]
GO:0006464        [VIEW IN EMBL-EBI]
GO:0006468        [VIEW IN EMBL-EBI]
GO:0006793        [VIEW IN EMBL-EBI]
GO:0006796        [VIEW IN EMBL-EBI]
GO:0006807        [VIEW IN EMBL-EBI]
GO:0007154        [VIEW IN EMBL-EBI]
GO:0007165        [VIEW IN EMBL-EBI]
GO:0007275        [VIEW IN EMBL-EBI]
GO:0007602        [VIEW IN EMBL-EBI]
GO:0008150        [VIEW IN EMBL-EBI]
GO:0008152        [VIEW IN EMBL-EBI]
GO:0009314        [VIEW IN EMBL-EBI]
GO:0009416        [VIEW IN EMBL-EBI]
GO:0009581        [VIEW IN EMBL-EBI]
GO:0009582        [VIEW IN EMBL-EBI]
GO:0009583        [VIEW IN EMBL-EBI]
GO:0009585        [VIEW IN EMBL-EBI]
GO:0009605        [VIEW IN EMBL-EBI]
GO:0009606        [VIEW IN EMBL-EBI]
GO:0009628        [VIEW IN EMBL-EBI]
GO:0009629        [VIEW IN EMBL-EBI]
GO:0009630        [VIEW IN EMBL-EBI]
GO:0009637        [VIEW IN EMBL-EBI]
GO:0009638        [VIEW IN EMBL-EBI]
GO:0009639        [VIEW IN EMBL-EBI]
GO:0009640        [VIEW IN EMBL-EBI]
GO:0009642        [VIEW IN EMBL-EBI]
GO:0009791        [VIEW IN EMBL-EBI]
GO:0009881        [VIEW IN EMBL-EBI]
GO:0009883        [VIEW IN EMBL-EBI]
GO:0009889        [VIEW IN EMBL-EBI]
GO:0009890        [VIEW IN EMBL-EBI]
GO:0009892        [VIEW IN EMBL-EBI]
GO:0009987        [VIEW IN EMBL-EBI]
GO:0010017        [VIEW IN EMBL-EBI]
GO:0010018        [VIEW IN EMBL-EBI]
GO:0010114        [VIEW IN EMBL-EBI]
GO:0010161        [VIEW IN EMBL-EBI]
GO:0010201        [VIEW IN EMBL-EBI]
GO:0010203        [VIEW IN EMBL-EBI]
GO:0010218        [VIEW IN EMBL-EBI]
GO:0010468        [VIEW IN EMBL-EBI]
GO:0010556        [VIEW IN EMBL-EBI]
GO:0010558        [VIEW IN EMBL-EBI]
GO:0010605        [VIEW IN EMBL-EBI]
GO:0010608        [VIEW IN EMBL-EBI]
GO:0010629        [VIEW IN EMBL-EBI]
GO:0016301        [VIEW IN EMBL-EBI]
GO:0016310        [VIEW IN EMBL-EBI]
GO:0016604        [VIEW IN EMBL-EBI]
GO:0016740        [VIEW IN EMBL-EBI]
GO:0016772        [VIEW IN EMBL-EBI]
GO:0016773        [VIEW IN EMBL-EBI]
GO:0017148        [VIEW IN EMBL-EBI]
GO:0019222        [VIEW IN EMBL-EBI]
GO:0019538        [VIEW IN EMBL-EBI]
GO:0023052        [VIEW IN EMBL-EBI]
GO:0031323        [VIEW IN EMBL-EBI]
GO:0031324        [VIEW IN EMBL-EBI]
GO:0031326        [VIEW IN EMBL-EBI]
GO:0031327        [VIEW IN EMBL-EBI]
GO:0031516        [VIEW IN EMBL-EBI]
GO:0031974        [VIEW IN EMBL-EBI]
GO:0031981        [VIEW IN EMBL-EBI]
GO:0032268        [VIEW IN EMBL-EBI]
GO:0032269        [VIEW IN EMBL-EBI]
GO:0032501        [VIEW IN EMBL-EBI]
GO:0032502        [VIEW IN EMBL-EBI]
GO:0034248        [VIEW IN EMBL-EBI]
GO:0034249        [VIEW IN EMBL-EBI]
GO:0036211        [VIEW IN EMBL-EBI]
GO:0038023        [VIEW IN EMBL-EBI]
GO:0042221        [VIEW IN EMBL-EBI]
GO:0042802        [VIEW IN EMBL-EBI]
GO:0043170        [VIEW IN EMBL-EBI]
GO:0043226        [VIEW IN EMBL-EBI]
GO:0043227        [VIEW IN EMBL-EBI]
GO:0043229        [VIEW IN EMBL-EBI]
GO:0043231        [VIEW IN EMBL-EBI]
GO:0043233        [VIEW IN EMBL-EBI]
GO:0043412        [VIEW IN EMBL-EBI]
GO:0044237        [VIEW IN EMBL-EBI]
GO:0044238        [VIEW IN EMBL-EBI]
GO:0044260        [VIEW IN EMBL-EBI]
GO:0044267        [VIEW IN EMBL-EBI]
GO:0044422        [VIEW IN EMBL-EBI]
GO:0044424        [VIEW IN EMBL-EBI]
GO:0044428        [VIEW IN EMBL-EBI]
GO:0044446        [VIEW IN EMBL-EBI]
GO:0044451        [VIEW IN EMBL-EBI]
GO:0044464        [VIEW IN EMBL-EBI]
GO:0046685        [VIEW IN EMBL-EBI]
GO:0048519        [VIEW IN EMBL-EBI]
GO:0048523        [VIEW IN EMBL-EBI]
GO:0048856        [VIEW IN EMBL-EBI]
GO:0050789        [VIEW IN EMBL-EBI]
GO:0050794        [VIEW IN EMBL-EBI]
GO:0050896        [VIEW IN EMBL-EBI]
GO:0051171        [VIEW IN EMBL-EBI]
GO:0051172        [VIEW IN EMBL-EBI]
GO:0051246        [VIEW IN EMBL-EBI]
GO:0051248        [VIEW IN EMBL-EBI]
GO:0051606        [VIEW IN EMBL-EBI]
GO:0051716        [VIEW IN EMBL-EBI]
GO:0055122        [VIEW IN EMBL-EBI]
GO:0060089        [VIEW IN EMBL-EBI]
GO:0060255        [VIEW IN EMBL-EBI]
GO:0065007        [VIEW IN EMBL-EBI]
GO:0070013        [VIEW IN EMBL-EBI]
GO:0071214        [VIEW IN EMBL-EBI]
GO:0071478        [VIEW IN EMBL-EBI]
GO:0071482        [VIEW IN EMBL-EBI]
GO:0071489        [VIEW IN EMBL-EBI]
GO:0071490        [VIEW IN EMBL-EBI]
GO:0071491        [VIEW IN EMBL-EBI]
GO:0071704        [VIEW IN EMBL-EBI]
GO:0080090        [VIEW IN EMBL-EBI]
GO:0097159        [VIEW IN EMBL-EBI]
GO:0104004        [VIEW IN EMBL-EBI]
GO:0140096        [VIEW IN EMBL-EBI]
GO:1901363        [VIEW IN EMBL-EBI]
GO:1901564        [VIEW IN EMBL-EBI]
GO:2000112        [VIEW IN EMBL-EBI]
GO:2000113        [VIEW IN EMBL-EBI]

Sequence

CDS:  
ATGTCTTCATCAAGACCAGCCCAATCATCCAGCAATACAGGGAAATCAAGACACAGTGCTAGAGTCATTGCCCAGACTACTATAGATGCAAAGCTTCATGCAGATTTTGAGACTTCGGGTACTTCCTTCGACTATTCAAATTCAGTGCGAGTTAGCAGCACAGCTGGTGGAGATCAACAGCCTAGATCTGATAGAGTAACCACCGCTTATCTTCATCATATACAGAAAGGAAAGCTGATCCAGCCATTTGGATGCTTGCTAGCCTTAGATGAGAAAACCTTCAAGGTCATTGCATACAGTGAGAATGCACCTGAATTGTTGACAATGGTTAATCATGCAGTCCCGAGCGTTGGGGATCATCCAGTTCTTGGCATTGGAAGTGACATAAAGACCATCTTTACTGCCCCCAGTGCCTCTGCATTGCAAAAGGCGCTAGGATTTGGGGAAGTATCTCTTTTGAATCCCATTTTGGTCCACTGCAAAACTTCTGGGAAGCCCTTTTATGCAATCGTGCATCGTGTAACAGGCAGCTTGATCATTGACTTCGAACCTGTGAAGCCATATGAAGTCCCCATGACTGCTGCCGGGGCTCTACAATCATACAAGCTCGCAGCCAAAGCAATAACCCGGTTGCAGTCTTTGCCTAGTGGGAGCATGGAGAGGCTTTGTGATACTATGATTCAGGAGGTGTTTGAACTCACAGGTTATGATAGGGTGATGGCCTATAAATTTCATGAGGATGATCATGGAGAAGTGGTCTCTGAGATTACAAAGTCTGGCCTGGAACCTTATTTAGGTTTGCATTATCCGGCCACTGATATTCCTCAGGCTGCACGTTTCCTATTTATGAAGAATAAAGTCCGTATGATTGTTGATTGTCGTGCAAGACATGTCAAAGTACTTCAAGATGAGAAACTTCCCTTTGATCTGACCTTGTGTGGTTCAACCTTAAGGGCCCCACACAGTTGCCATTTACAGTATATGGAGAACATGAATTCCATTGCTTCTCTAGTAATGGCAGTTGTAGTGAATGACGAGGAAGAAGAGGGTGACAATACACTACCACAGAAGAGAAAGAGACTTTGGGGTTTAGTAGTTTGTCATAATACAACTCCAAGGTTTGTTCCATTTCCTCTTAGGTATGCATGTGAGTTTTTGGCTCAAGTATTTGCCATACATGTTAATAAGGAGTTGGAATTAGAATATCAGATCCTTGAGAAGAACATATTGCGTACTCAGACACTCTTATGCGATATGCTTATGAGGGATGCGCCCTTGGGTATTGTAACACAGAGCCCAAATATTATGGATCTCGTTAAATGTGACGGGGCTGCTTTATTGTACAAGAACAAAATATGGAGATTGGGAGTGACTCCAAATGACTTCCAGCTACATGATATAGTGTCATGGCTTTCTGAGTACCATATGGATTCTACAGGTTTAAGTGCGGACAGCTTATATGATGCGGGTTACCCGGGGGCCCTGGCTCTTGGTGATGTAGTTTGCGGAATGGCAGCTGTGAGGATTTCTCCCAAGGACATGATTTTCTGGTTCCGATCCCAGACAGCTTCAGAGGTTCGATGGGGTGGTGCAAAGCATGAACCTGATGAGAAAGATGACGGTAGGAAGATGCATCCAAGATCATCATTCAAGGCTTTCCTTGAAGTTGTCAAGACAAGAAGCTTACCTTGGAAGGACTATGAAATGGATGCAATCCATTCTTTGCAGCTTATATTGAGGAATGCATTCAAGGATGTTGGAACTTTGGATTTGGATACTAAATCAATCCACTCAAAACTCTGTGATCTGAAAATAGAAGGAATGAAGGAACTGGAAGCGGTGACTAGTGAAATGGTCCGCCTCATCGAAACAGCTACAGTACCAATTTTGGCTGTTGATGTAGATGGTCTGGTCAATGGGTGGAATACAAAAATCGCTGAGTTAACCGGCCTTTCTGTTGATAAAGCAATTGGAAAGCATTTCCTCACACTCGTGGAAGATTCTTCAATTGATACCGTCAAAAGGATGTTGTACTTGGCATTGCAAGGACAAGAGGAGCAGAATATCCAATTTGAGATCAAAACACATGGATCTAAGATTAATGATGACCCCATAACTTTAATTGTGAATGCCTGTGCGAGCAGGGACCTTCATGATAATGTTGTTGGAGTATGTTTTGTGGCCCAAGATATCACTCCTCAGAAGACAGTCATGGACAAATTCACCAGGATTGAAGGTGATTACAAAGCGATTGTACAAAACCCAAACCCATTGATCCCTCCCATATTTGGTTCAGATGAATTTGGGTGGTGCTGTGAGTGGAATCCGGCAATGGTAAAGTTGACTGGGTGGAAGCGAGAGGAAGTTATAGACAAATTACTTTTGGCAGAGGTTTTCGGGACCAACATGGCATGCTGTCGTCTGAAGAATCAAGAGGCTTTTGTAAATCTTGGCATTGTACTAAACAAAGCCATGAGTGGTCAGGATCCTGAGAAGGTTCCTTTTGGTTTCTTTGCTCGTAATGGGAAGTATGCGGAATGCTTGTTATGTGTCAATAAGAAATTGGACAGGGAGGGAGCCGTCACTGGTGTGTTCTGTTTCTTGCAGCTTGCCAGTCATGAGCTGCAACAAGCACTTCATGTCCAGCGATTATCAGAGCAAACTGCGCTGAAGAGATTGAAAGCTTTAGCTTATACTAAAAGGCAGATCCGAAATCCACTATCTGGGATCATATTTTCTCGGAAAATGATGGAAGGCACTGAGCTAGGAGCAGAACAGAAACGGCTTTTGCATACCAGTGCACAGTGCCAGCGTCAGCTTCATAAGATTCTTGATGACTCAGATCTTGATAGTATTATTGATGGCTACTTGGATCTAGAAATGGTTGAGTTTACCCTGAATGAAGTATTGGTTGCCTCTATCAGTCAAGTGATGATGAAGAGCAATGCAAAGGGCATCCGAATAGTCAATGAAACGGCTGAACAGATCATGAGTGAAACCTTATATGGAGATAGTATTAGGCTTCAACAGGTCTTAGCTGATTTCTTGTCGATATCAATTAATTTCGTGCCAAATGGAGGCCAGCTTATGGTTTCATCTAGTTTGACCAAAGATCAATTGGGGCGGTCTGTTCATCTTGCATATCTGGAGCTCAGGATAACACATGCCGGTGGTGGGATACCTGAACCGTTGCTGGATCAAATGTTTGGAAGTGAGGGAGATACATCTGAGGAAGGCATTAGCTTGCTAATCAGCCGAAAACTGGTAAAACTTATGAACGGAGATGTACAATATCTAAGGGAAGCAGGAAAGTCGACTTTCATCGTATCTGTTGAACTTGCTGCAGCCCATTAG
Protein:  
MSSSRPAQSSSNTGKSRHSARVIAQTTIDAKLHADFETSGTSFDYSNSVRVSSTAGGDQQPRSDRVTTAYLHHIQKGKLIQPFGCLLALDEKTFKVIAYSENAPELLTMVNHAVPSVGDHPVLGIGSDIKTIFTAPSASALQKALGFGEVSLLNPILVHCKTSGKPFYAIVHRVTGSLIIDFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMIQEVFELTGYDRVMAYKFHEDDHGEVVSEITKSGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCRARHVKVLQDEKLPFDLTLCGSTLRAPHSCHLQYMENMNSIASLVMAVVVNDEEEEGDNTLPQKRKRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKELELEYQILEKNILRTQTLLCDMLMRDAPLGIVTQSPNIMDLVKCDGAALLYKNKIWRLGVTPNDFQLHDIVSWLSEYHMDSTGLSADSLYDAGYPGALALGDVVCGMAAVRISPKDMIFWFRSQTASEVRWGGAKHEPDEKDDGRKMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKDVGTLDLDTKSIHSKLCDLKIEGMKELEAVTSEMVRLIETATVPILAVDVDGLVNGWNTKIAELTGLSVDKAIGKHFLTLVEDSSIDTVKRMLYLALQGQEEQNIQFEIKTHGSKINDDPITLIVNACASRDLHDNVVGVCFVAQDITPQKTVMDKFTRIEGDYKAIVQNPNPLIPPIFGSDEFGWCCEWNPAMVKLTGWKREEVIDKLLLAEVFGTNMACCRLKNQEAFVNLGIVLNKAMSGQDPEKVPFGFFARNGKYAECLLCVNKKLDREGAVTGVFCFLQLASHELQQALHVQRLSEQTALKRLKALAYTKRQIRNPLSGIIFSRKMMEGTELGAEQKRLLHTSAQCQRQLHKILDDSDLDSIIDGYLDLEMVEFTLNEVLVASISQVMMKSNAKGIRIVNETAEQIMSETLYGDSIRLQQVLADFLSISINFVPNGGQLMVSSSLTKDQLGRSVHLAYLELRITHAGGGIPEPLLDQMFGSEGDTSEEGISLLISRKLVKLMNGDVQYLREAGKSTFIVSVELAAAH